Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011064.1 Corchorus capsularis cultivar CVL-1 contig11085, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19766

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
231--261
2
15.5
2
100
0
62
48
0
0
51
1.00
4663--4736
21
3.5
21
71
20
73
41
4
14
39
1.65
4661--4744
42
2.0
42
95
0
150
38
4
15
41
1.68
4890--4952
32
2.0
32
87
0
90
30
19
25
25
1.98
5256--5329
30
2.4
31
86
2
105
36
16
14
32
1.89
6064--6134
33
2.2
33
84
2
99
11
35
38
15
1.83
8332--8385
27
2.0
27
100
0
108
25
11
29
33
1.91
8900--8925
3
8.7
3
100
0
52
65
0
0
34
0.93
11676--11936
103
2.5
105
85
7
361
43
9
7
39
1.65
11744--11958
107
2.0
103
80
7
236
46
9
8
35
1.66
12892--14659
882
2.0
881
99
0
3518
24
17
20
37
1.94
14864--14901
19
2.0
19
100
0
76
21
5
15
57
1.57
17949--17975
2
13.5
2
100
0
54
48
0
0
51
1.00

Tables:   1

The End!