Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01001107.1 Corchorus capsularis cultivar CVL-1 contig01107, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2728

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
93--406
22
14.6
21
70
14
124
37
10
17
34
1.83
113--365
44
5.8
44
73
11
137
38
9
16
35
1.81
297--372
23
3.4
22
82
10
91
35
7
21
35
1.82
549--595
22
2.2
22
84
3
60
53
4
14
27
1.60
622--712
22
4.3
22
65
16
57
41
8
13
36
1.75

Tables:   1

The End!