Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011072.1 Corchorus capsularis cultivar CVL-1 contig11093, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27447

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--234
124
1.9
124
84
5
312
28
14
18
37
1.91
109--4323
322
13.1
322
83
4
4704
33
14
16
35
1.89
9899--9936
11
3.5
11
89
10
51
39
0
2
57
1.12
10434--10468
1
35.0
1
100
0
70
100
0
0
0
0.00
10949--11016
31
2.2
31
89
0
100
27
17
7
47
1.74
22049--22234
95
2.0
93
87
3
266
30
7
23
38
1.83
22307--22352
14
3.5
14
80
11
53
34
17
2
45
1.61
22995--23045
17
3.0
17
72
11
50
50
11
7
29
1.67

Tables:   1

The End!