Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011075.1 Corchorus capsularis cultivar CVL-1 contig11096, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39320

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3388--3417
2
15.0
2
100
0
60
50
0
0
50
1.00
6134--6257
61
2.0
61
100
0
248
45
9
22
22
1.81
7319--7353
15
2.3
15
95
0
61
25
11
11
51
1.71
14232--14267
2
18.0
2
100
0
72
50
0
0
50
1.00
21615--21668
24
2.2
24
83
0
72
24
11
44
20
1.83
24916--25082
88
1.9
91
87
9
254
40
4
7
47
1.54
28450--28516
6
11.2
6
74
6
55
2
34
5
56
1.39
28436--28516
12
6.7
12
72
5
56
3
35
4
55
1.39
36810--36871
28
2.2
28
97
0
115
41
1
19
37
1.61
36910--36991
29
2.8
30
82
14
91
20
21
12
45
1.84
39048--39117
29
2.4
29
85
2
86
37
28
14
20
1.91

Tables:   1

The End!