Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011084.1 Corchorus capsularis cultivar CVL-1 contig11105, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4967

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
147--279
59
2.3
59
86
2
187
28
21
11
38
1.88
147--280
60
2.3
59
88
3
189
28
22
11
38
1.88
1280--1326
24
2.0
24
91
4
78
31
21
8
38
1.83
1901--1980
22
3.7
22
80
8
92
43
10
11
35
1.74
1909--2025
44
2.7
44
80
6
130
43
5
11
39
1.65
1901--2030
22
6.0
22
72
19
85
43
6
12
37
1.69
2055--2110
22
2.5
22
82
0
76
37
8
17
35
1.82
2258--2357
22
4.6
21
72
8
67
37
11
12
40
1.78
2302--2353
21
2.4
22
78
15
72
38
9
13
38
1.77
2221--2379
65
2.4
65
81
8
169
35
8
13
41
1.76
3886--4967
336
3.2
336
79
7
967
37
14
13
34
1.86
4184--4967
336
2.4
331
83
4
973
37
14
13
34
1.86

Tables:   1

The End!