Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011089.1 Corchorus capsularis cultivar CVL-1 contig11110, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38232

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11589--14669
655
4.7
647
79
7
3050
35
15
14
34
1.88
11595--14668
324
9.5
316
76
10
2376
35
15
14
34
1.88
15645--15761
52
2.2
52
93
3
200
27
12
18
41
1.87
34493--34554
31
2.1
30
93
6
108
27
0
29
43
1.55
35389--35422
17
2.0
17
88
11
52
47
0
5
47
1.26
37762--37797
2
18.0
2
100
0
72
50
0
0
50
1.00
37822--37881
30
2.0
30
86
0
84
36
3
20
40
1.69

Tables:   1

The End!