Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011092.1 Corchorus capsularis cultivar CVL-1 contig11113, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48004

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
484--623
31
4.5
31
76
8
104
18
21
25
34
1.96
533--620
31
2.8
31
89
3
133
15
17
28
38
1.90
3460--3558
29
3.3
29
70
5
99
34
14
20
31
1.92
3430--3588
60
2.7
60
88
2
239
35
15
19
29
1.92
3489--3620
31
4.3
31
73
11
128
38
13
18
28
1.89
3650--3818
31
5.6
30
72
16
143
26
20
20
33
1.97
3685--3783
29
3.3
29
73
15
112
26
23
18
32
1.97
3657--3813
60
2.6
60
98
0
305
25
19
19
35
1.96
23384--23420
1
37.0
1
100
0
74
100
0
0
0
0.00
27607--27903
147
2.1
143
91
3
472
19
27
25
27
1.99
28673--28726
28
1.9
28
88
7
83
40
11
16
31
1.84
28917--28947
2
15.5
2
100
0
62
51
0
0
48
1.00
35143--35170
2
14.0
2
100
0
56
0
50
0
50
1.00
42325--42353
1
29.0
1
100
0
58
100
0
0
0
0.00

Tables:   1

The End!