Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011093.1 Corchorus capsularis cultivar CVL-1 contig11114, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29878

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1540--1592
25
2.1
26
89
3
81
47
7
16
28
1.74
2846--2870
2
12.5
2
100
0
50
52
0
0
48
1.00
7774--7831
18
3.2
18
66
33
52
44
29
8
17
1.78
7754--7967
36
5.9
36
91
0
320
40
32
12
14
1.83
16588--16889
81
3.9
80
79
12
299
29
17
23
29
1.97
16712--16848
69
2.0
70
86
1
195
29
16
24
29
1.97
19788--19812
2
12.5
2
100
0
50
52
0
0
48
1.00
19958--20000
21
2.0
21
100
0
86
23
25
32
18
1.97

Tables:   1

The End!