Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011098.1 Corchorus capsularis cultivar CVL-1 contig11119, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46403

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--1199
333
3.6
329
77
9
1012
33
13
15
36
1.87
4449--6512
327
6.4
320
77
8
1908
33
14
17
35
1.90
10315--10372
23
2.5
23
82
2
62
48
8
15
27
1.74
15250--15366
58
2.0
58
100
0
234
30
13
27
28
1.94
26551--26575
5
5.0
5
100
0
50
60
0
0
40
0.97
27865--27909
23
2.0
23
100
0
90
26
22
0
51
1.49

Tables:   1

The End!