Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011101.1 Corchorus capsularis cultivar CVL-1 contig11122, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  112640

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2199--2240
22
1.9
22
85
9
59
38
4
23
33
1.76
17064--17128
24
2.6
25
92
4
114
24
9
0
66
1.21
25931--25963
7
4.9
7
96
3
59
15
30
15
39
1.88
45093--45117
2
12.5
2
100
0
50
52
0
0
48
1.00
63022--63056
16
2.1
17
89
10
54
25
25
22
25
2.00
73285--73485
100
2.0
100
99
0
393
29
24
19
26
1.98
97297--97324
12
2.3
12
100
0
56
17
14
42
25
1.87
101663--101700
6
6.2
6
90
6
58
31
0
21
47
1.51
103836--103915
18
4.3
18
75
9
70
18
56
12
12
1.67
106781--106813
2
16.5
2
100
0
66
51
0
0
48
1.00

Tables:   1

The End!