Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011109.1 Corchorus capsularis cultivar CVL-1 contig11130, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37780

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1306--1370
32
2.0
32
81
0
76
43
4
13
38
1.65
6969--7243
109
2.5
109
92
4
446
48
1
11
38
1.50
18880--18943
31
2.1
31
81
0
74
35
26
23
14
1.93
23895--23982
45
2.0
45
88
0
131
23
35
17
23
1.95
28908--28948
21
2.0
21
100
0
82
19
39
4
36
1.73
30273--30424
78
2.0
74
94
5
268
30
13
16
39
1.87
35089--35178
45
2.0
45
97
0
171
21
22
34
22
1.97
35499--35588
45
2.0
45
93
0
153
21
22
32
24
1.98
34962--35767
410
2.0
410
96
0
1504
25
17
31
25
1.97
36613--36655
21
2.0
21
81
4
50
9
9
6
74
1.22
36590--36665
27
2.9
26
86
3
107
13
10
5
71
1.30
37471--37534
21
3.0
21
84
4
85
40
17
9
32
1.81

Tables:   1

The End!