Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011111.1 Corchorus capsularis cultivar CVL-1 contig11132, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  87384

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1575--1604
12
2.5
12
100
0
60
93
0
6
0
0.35
4994--5137
51
2.8
51
87
0
216
20
28
27
23
1.99
5111--5222
55
2.0
55
96
0
206
21
21
35
21
1.96
24084--24262
93
1.9
92
84
8
238
34
18
11
35
1.88
43195--43219
2
12.5
2
100
0
50
48
0
0
52
1.00
66865--66895
2
15.5
2
100
0
62
0
51
0
48
1.00
68418--68452
18
1.9
18
88
0
52
34
14
51
0
1.42

Tables:   1

The End!