Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011114.1 Corchorus capsularis cultivar CVL-1 contig11135, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61074

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1066--1099
17
1.9
18
88
5
52
64
5
8
20
1.43
1219--1249
2
15.5
2
100
0
62
51
0
0
48
1.00
5446--5527
31
2.7
31
86
1
103
37
25
12
24
1.90
16803--16914
56
2.0
56
100
0
224
42
10
14
32
1.80
30108--30147
7
5.7
7
96
0
62
42
5
37
15
1.68
36656--36688
6
5.8
6
89
10
52
87
0
12
0
0.53
48315--48487
84
2.0
84
97
1
328
27
19
10
42
1.83
59632--59702
35
2.0
37
88
5
110
23
15
11
49
1.77
60547--60628
40
2.0
40
100
0
164
39
30
0
30
1.57

Tables:   1

The End!