Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011116.1 Corchorus capsularis cultivar CVL-1 contig11137, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  65713

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5352--5392
3
13.7
3
100
0
82
65
0
0
34
0.93
16704--16772
31
2.3
29
85
7
93
43
8
24
23
1.82
18117--18341
110
2.0
111
91
0
362
41
16
14
27
1.87
28451--28523
24
3.0
24
79
0
83
34
27
15
23
1.94
39583--39609
6
4.5
6
100
0
54
85
0
14
0
0.61
39699--39743
21
2.1
22
87
4
65
42
8
11
37
1.72
40711--40882
83
2.0
85
86
7
242
31
16
14
37
1.89
51077--51107
2
15.5
2
100
0
62
48
0
0
51
1.00
51288--51363
40
2.0
39
87
10
113
18
17
11
52
1.74
56390--56425
17
2.0
19
89
10
58
50
16
0
33
1.46
59020--59046
2
13.5
2
100
0
54
48
0
0
51
1.00
62145--62178
2
16.5
2
93
6
59
47
2
0
50
1.16

Tables:   1

The End!