Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011119.1 Corchorus capsularis cultivar CVL-1 contig11140, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25873

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1102--1141
2
21.0
2
85
10
57
45
0
55
0
0.99
2787--2832
23
2.0
23
100
0
92
43
13
17
26
1.85
6915--6943
2
14.5
2
100
0
58
51
0
0
48
1.00
13116--13149
17
2.0
17
94
0
59
55
2
0
41
1.15
13116--13152
9
4.2
9
89
6
58
54
2
0
43
1.14
19469--19519
20
2.5
21
80
6
68
23
5
15
54
1.63
19742--19768
13
2.1
13
100
0
54
85
0
14
0
0.61
19733--19768
7
5.3
7
90
6
56
80
0
19
0
0.71
25790--25861
31
2.3
31
82
2
90
20
9
6
62
1.49

Tables:   1

The End!