Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01001112.1 Corchorus capsularis cultivar CVL-1 contig01112, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9168

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2544--2758
115
1.8
117
95
3
389
39
11
17
32
1.85
3226--3488
22
12.0
22
67
15
100
39
17
9
32
1.82
3517--3576
22
2.7
22
82
12
70
31
25
3
40
1.72
3517--3575
21
2.6
24
76
17
72
32
23
3
40
1.71
3595--3805
22
9.5
22
73
7
122
33
13
11
41
1.80
3682--3805
44
2.8
44
87
0
167
32
11
13
42
1.80
8888--8935
22
2.2
22
92
0
78
25
31
8
35
1.85

Tables:   1

The End!