Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011124.1 Corchorus capsularis cultivar CVL-1 contig11145, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23988

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5816--5854
13
2.9
13
84
3
51
0
7
5
87
0.68
11113--11271
60
2.7
59
81
6
187
30
16
13
38
1.88
11621--11655
18
2.1
17
89
10
54
17
25
40
17
1.90
14090--14159
36
1.9
36
100
0
140
45
14
5
34
1.68
15938--16014
29
2.6
29
87
6
102
18
25
15
40
1.90
16883--16913
16
1.9
16
93
0
53
38
12
19
29
1.89
17416--17449
16
2.0
16
88
11
50
29
23
0
47
1.52
18645--18715
37
1.9
37
97
0
133
23
28
21
26
1.99
23336--23373
14
2.5
15
83
12
51
42
0
0
57
0.98
23835--23909
30
2.5
31
82
6
91
28
28
17
26
1.98

Tables:   1

The End!