Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011125.1 Corchorus capsularis cultivar CVL-1 contig11146, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59602

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
812--892
29
2.7
29
80
14
85
24
24
18
32
1.97
13394--13650
129
2.0
129
84
0
334
28
22
19
29
1.98
15880--15915
11
3.2
11
88
7
54
0
19
0
80
0.71
24566--24604
20
1.9
21
84
5
53
15
17
10
56
1.66
25880--25904
12
2.1
12
100
0
50
0
16
8
76
1.02
36794--36826
15
2.1
16
88
5
50
9
12
0
78
0.95
40443--40499
3
19.0
3
96
0
105
33
1
0
64
1.04
41232--41270
10
3.7
10
83
10
51
61
7
28
2
1.37
52722--52916
75
2.6
75
90
3
311
31
23
15
29
1.95
57935--58259
66
4.9
66
91
1
456
28
23
20
27
1.99
57876--58199
132
2.4
132
89
4
470
30
23
18
27
1.97
57876--58259
132
2.9
132
86
4
466
29
22
19
28
1.98
57876--58259
198
1.9
201
82
5
490
29
22
19
28
1.98

Tables:   1

The End!