Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011130.1 Corchorus capsularis cultivar CVL-1 contig11151, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67508

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2717--2745
10
3.0
10
95
5
51
0
0
93
6
0.36
4351--4377
2
13.5
2
100
0
54
48
0
0
51
1.00
6631--6656
13
2.0
13
100
0
52
15
0
76
7
0.99
6756--6784
4
7.2
4
100
0
58
24
24
0
51
1.48
9109--9146
20
1.9
20
94
0
67
47
10
15
26
1.78
9154--9182
14
2.1
14
100
0
58
34
0
6
58
1.25
16205--16250
2
23.0
2
81
0
56
50
8
0
41
1.33
19503--19536
10
3.2
10
91
8
50
41
0
11
47
1.40
29316--29341
2
13.0
2
100
0
52
0
50
0
50
1.00
63127--63154
14
2.0
14
100
0
56
21
21
0
57
1.41
64126--64152
14
1.9
14
100
0
54
18
14
14
51
1.76
64835--67508
318
8.4
319
78
8
2259
36
16
14
32
1.89
64835--67508
639
4.2
629
79
8
2526
36
16
14
32
1.89

Tables:   1

The End!