Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011140.1 Corchorus capsularis cultivar CVL-1 contig11161, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16636

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
631--685
27
2.0
27
100
0
110
25
10
18
45
1.82
7444--7493
22
2.3
22
86
3
66
24
14
8
54
1.66
7451--7494
22
2.0
22
90
0
70
22
13
9
54
1.67
7927--7979
26
2.0
27
88
3
81
18
18
7
54
1.67
14860--14969
57
1.9
57
88
0
166
40
22
13
22
1.89
14936--15234
21
14.4
20
83
7
339
39
22
12
26
1.88
14955--15234
83
3.4
82
88
3
393
40
21
11
26
1.87
14937--15234
62
4.8
63
86
3
372
39
22
11
26
1.88
15354--15385
16
2.0
16
100
0
64
37
0
6
56
1.25
16317--16399
26
3.2
25
79
14
98
49
7
1
42
1.38
16317--16363
2
23.0
2
87
12
69
48
4
0
46
1.21

Tables:   1

The End!