Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011142.1 Corchorus capsularis cultivar CVL-1 contig11163, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48336

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5829--5885
3
19.0
3
100
0
114
33
0
0
66
0.92
14479--14640
60
2.7
60
82
1
191
37
16
18
28
1.92
14539--14638
31
3.3
31
65
10
80
39
15
18
28
1.90
16523--16576
23
2.3
23
93
0
90
16
9
27
46
1.78
20049--20101
27
2.0
27
82
7
65
39
11
1
47
1.50
33660--33692
2
16.5
2
100
0
66
0
0
48
51
1.00
36282--36803
260
2.0
259
92
1
875
34
22
15
27
1.94
37053--37078
1
26.0
1
100
0
52
100
0
0
0
0.00
37642--37705
30
2.1
31
97
2
121
68
6
18
6
1.32
38845--38870
11
2.4
11
100
0
52
73
7
7
11
1.26
39071--39105
3
11.3
3
93
6
61
31
0
2
65
1.07
41523--41565
17
2.6
16
82
10
50
34
13
23
27
1.93
47088--47131
21
2.1
21
87
8
63
18
34
9
38
1.82
47498--47591
33
2.8
33
85
6
120
10
30
41
17
1.83
47520--47570
17
3.1
17
70
13
52
7
29
43
19
1.79

Tables:   1

The End!