Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011145.1 Corchorus capsularis cultivar CVL-1 contig11166, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30183

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
495--539
23
2.0
23
86
4
65
44
26
11
17
1.82
2529--2566
20
1.9
20
100
0
76
68
15
10
5
1.36
7040--7065
6
4.3
6
100
0
52
69
0
0
30
0.89
13996--14031
2
18.5
2
94
5
65
52
0
0
47
1.00
17351--17378
2
14.0
2
100
0
56
50
0
0
50
1.00
17568--17606
19
2.1
19
90
0
60
33
15
0
51
1.44
18736--18764
2
14.5
2
100
0
58
51
0
0
48
1.00
20804--20893
47
1.9
47
90
4
146
34
13
14
37
1.85
26191--26218
6
4.7
6
100
0
56
82
17
0
0
0.68

Tables:   1

The End!