Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011146.1 Corchorus capsularis cultivar CVL-1 contig11167, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40266

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2976--3031
27
2.0
28
82
3
69
21
25
3
50
1.65
6876--6913
6
6.7
6
93
6
62
84
15
0
0
0.63
6877--6916
5
7.4
5
97
2
53
82
17
0
0
0.67
9157--9216
19
3.1
19
81
9
75
41
10
15
33
1.80
9152--9215
21
3.1
21
82
8
87
40
9
17
32
1.81
10491--10596
31
3.5
31
72
14
121
33
19
20
26
1.97
10628--10760
31
4.4
31
77
11
166
24
20
18
36
1.95
10658--10797
60
2.3
60
96
0
253
27
20
17
35
1.95
10691--10789
29
3.3
29
69
15
94
27
21
18
33
1.96
10660--10820
60
2.7
60
91
1
216
27
19
16
36
1.93
14450--14528
39
2.0
39
95
0
140
35
21
16
26
1.94
34389--34458
29
2.4
29
85
2
86
41
27
11
20
1.86
36914--36947
16
2.1
17
88
5
52
82
0
14
2
0.79
37762--37836
33
2.3
33
86
4
98
5
45
9
40
1.59

Tables:   1

The End!