Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011148.1 Corchorus capsularis cultivar CVL-1 contig11169, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57608

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5701--5733
2
16.5
2
100
0
66
48
0
51
0
1.00
8360--8415
21
2.7
21
80
0
67
30
8
19
41
1.82
15853--15889
18
2.0
20
89
10
60
48
13
21
16
1.80
34866--34901
16
2.2
16
90
0
54
61
25
5
8
1.46
36290--36368
38
2.1
39
90
7
126
20
5
11
63
1.46
37146--37204
30
2.0
30
90
6
93
28
16
15
38
1.89
37418--37447
15
2.0
15
100
0
60
20
13
13
53
1.72
38117--38189
38
1.9
38
100
0
146
24
16
16
42
1.88
41354--41436
43
1.9
43
90
0
130
26
21
19
32
1.97
41799--41823
11
2.3
11
100
0
50
76
0
8
16
1.02
42542--42567
1
26.0
1
100
0
52
0
0
0
100
0.00
51716--51767
25
2.1
25
96
0
95
38
11
9
40
1.74
51741--52153
150
2.7
151
84
6
519
38
19
12
29
1.88
55276--55333
27
2.3
26
82
11
68
46
22
5
25
1.72

Tables:   1

The End!