Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011151.1 Corchorus capsularis cultivar CVL-1 contig11172, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39801

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2945--2982
18
2.1
18
90
9
60
31
31
34
2
1.72
10534--10563
2
15.0
2
100
0
60
50
0
0
50
1.00
11874--11973
51
2.0
51
91
0
164
32
15
13
40
1.85
15627--15723
49
2.0
49
93
0
167
35
21
19
23
1.96
15721--15783
33
1.9
33
93
0
108
30
23
19
26
1.98
15751--15862
57
2.0
57
98
0
215
29
32
12
25
1.93
15880--15928
24
2.0
25
92
4
82
38
26
12
22
1.89
15943--15969
13
2.1
13
100
0
54
29
14
29
25
1.95
25969--26001
2
16.5
2
100
0
66
48
0
0
51
1.00
33711--33754
11
4.2
11
82
8
56
36
2
2
59
1.23
33729--33759
12
2.5
12
94
5
53
38
0
0
61
0.96
33716--33759
17
2.6
16
89
7
61
36
0
2
61
1.09

Tables:   1

The End!