Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011158.1 Corchorus capsularis cultivar CVL-1 contig11179, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  54203

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
51--75
2
12.5
2
100
0
50
52
0
0
48
1.00
68--4543
329
13.5
331
84
4
4956
37
14
13
34
1.86
5041--5085
23
2.0
23
82
4
56
62
8
8
20
1.51
7921--7946
13
2.0
13
100
0
52
61
15
7
15
1.55
20587--20617
13
2.4
13
94
0
53
22
3
6
67
1.28
20906--20953
15
3.2
15
88
8
71
0
14
0
85
0.60
20912--20953
8
5.5
8
94
5
70
0
11
0
88
0.53
20906--20952
7
6.4
7
88
9
67
0
14
0
85
0.61
20906--20952
22
2.1
22
96
0
85
0
14
0
85
0.61
22806--22838
2
16.5
2
100
0
66
51
48
0
0
1.00
32524--32613
45
1.9
46
88
6
137
28
24
16
30
1.97
32603--32785
60
2.8
64
84
10
266
21
34
9
33
1.87
32603--32778
69
2.7
64
87
7
252
22
34
9
33
1.87
50119--50157
2
20.0
2
89
5
62
51
0
0
48
1.00
50576--50644
35
1.9
36
97
2
131
42
1
17
39
1.58
51502--51600
31
3.3
31
83
8
141
25
24
20
30
1.99
51502--51586
29
2.8
30
87
3
127
27
23
18
30
1.98

Tables:   1

The End!