Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011159.1 Corchorus capsularis cultivar CVL-1 contig11180, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8453

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1515--1539
11
2.3
11
100
0
50
0
8
0
92
0.40
1594--1648
12
4.5
12
95
4
101
34
16
23
25
1.95
1594--1648
25
2.2
24
96
3
101
34
16
23
25
1.95
3012--3037
10
2.6
10
100
0
52
30
7
23
38
1.83
3030--3117
40
2.2
39
78
15
92
37
14
21
26
1.92
3053--3117
20
3.2
20
72
23
57
38
15
21
24
1.92
5510--5539
10
3.0
10
90
0
51
50
0
13
36
1.42
6642--6672
2
16.0
2
93
6
55
48
0
0
51
1.00
7699--7725
2
13.5
2
100
0
54
51
0
0
48
1.00

Tables:   1

The End!