Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011167.1 Corchorus capsularis cultivar CVL-1 contig11188, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10677

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6296--6339
22
2.0
22
86
0
61
38
6
6
47
1.57
6354--6821
22
21.8
22
67
11
130
35
15
9
39
1.81
6641--6720
23
3.5
23
86
6
101
40
15
6
38
1.72
6809--6878
20
3.4
20
69
7
68
40
14
5
40
1.69
6808--6905
42
2.3
42
100
0
196
44
14
5
35
1.67
6829--6900
22
3.4
22
69
7
76
48
11
5
34
1.62
7116--7197
22
3.8
22
72
13
80
39
8
10
41
1.71
7137--7550
22
18.6
22
69
15
203
34
16
10
38
1.82

Tables:   1

The End!