Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011170.1 Corchorus capsularis cultivar CVL-1 contig11191, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25136

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--81
32
2.5
32
89
0
117
9
39
38
12
1.76
2--112
32
3.4
32
87
1
114
10
36
38
13
1.80
177--257
42
1.9
42
92
0
135
32
20
9
37
1.86
17435--17519
44
1.9
44
97
0
161
36
17
10
35
1.85
20584--20744
49
3.4
48
65
20
120
34
6
17
40
1.76
20571--20755
94
2.0
94
94
0
325
32
7
16
43
1.75
21560--21593
1
34.0
1
93
0
59
2
0
0
97
0.19

Tables:   1

The End!