Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011171.1 Corchorus capsularis cultivar CVL-1 contig11192, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16319

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
926--1073
39
3.8
39
98
0
287
35
12
9
41
1.76
5878--5913
18
2.0
18
100
0
72
38
5
22
33
1.77
7426--7475
2
24.5
2
84
11
66
48
6
0
46
1.27
7414--7474
17
3.2
19
84
11
63
45
4
0
49
1.23
7628--7667
19
2.1
19
90
0
62
32
5
50
12
1.62
12205--12234
15
2.0
15
100
0
60
40
13
6
40
1.71
14230--14283
3
18.0
3
100
0
108
33
0
0
66
0.92
14987--15040
23
2.2
25
77
9
58
55
3
5
35
1.41

Tables:   1

The End!