Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011174.1 Corchorus capsularis cultivar CVL-1 contig11195, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5491

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
687--1049
194
1.9
195
87
4
543
34
14
16
34
1.89
2032--2202
31
5.6
31
71
15
151
32
21
19
26
1.97
2036--2199
60
2.7
61
92
2
278
32
21
19
26
1.97
2242--2403
60
2.7
57
87
5
216
28
20
17
33
1.95
2210--2408
31
6.6
29
70
13
125
29
20
17
33
1.95
4256--4536
111
2.5
109
88
7
404
47
1
11
39
1.49

Tables:   1

The End!