Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011179.1 Corchorus capsularis cultivar CVL-1 contig11200, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9505

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1610--1645
16
2.3
16
90
4
56
8
8
38
44
1.65
4355--4405
25
2.0
25
100
0
102
35
23
19
21
1.96
6293--6426
41
3.3
41
91
4
202
43
11
20
23
1.85
6570--6663
22
4.3
22
82
5
109
47
10
21
20
1.79
6568--6663
33
2.9
33
78
3
95
46
10
20
21
1.80
6570--6663
11
8.5
11
78
4
82
47
10
21
20
1.79
6657--7016
36
9.9
36
87
1
486
43
10
21
24
1.83
7077--7181
32
3.2
32
79
15
131
47
6
17
28
1.72
7087--7205
36
3.4
35
80
13
147
45
6
18
29
1.75
7077--7205
68
1.9
68
90
3
206
46
6
17
29
1.73

Tables:   1

The End!