Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01001119.1 Corchorus capsularis cultivar CVL-1 contig01119, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7067

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3165--3205
13
2.9
15
78
14
50
48
0
2
48
1.14
3455--3575
33
3.7
32
76
6
109
13
33
36
16
1.87
4644--4697
28
2.0
27
85
10
74
31
22
33
12
1.92
5174--5370
71
2.7
74
83
7
215
29
11
4
53
1.57
6517--6556
20
2.0
20
100
0
80
35
25
5
35
1.78

Tables:   1

The End!