Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011193.1 Corchorus capsularis cultivar CVL-1 contig11214, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21946

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
221--256
2
18.0
2
94
0
63
50
2
0
47
1.15
1533--1628
48
2.0
48
89
4
149
40
16
16
26
1.90
2544--2578
18
1.9
18
100
0
70
22
25
22
28
1.99
2545--2587
18
2.4
18
92
0
68
27
20
23
27
1.99
10552--10576
2
12.5
2
100
0
50
52
0
0
48
1.00
13247--13389
70
2.0
71
91
1
234
55
13
3
27
1.54
19305--19430
65
2.0
64
86
9
179
44
14
13
27
1.82
21004--21038
18
1.9
18
100
0
70
62
0
0
37
0.95
21340--21425
45
1.9
45
83
4
111
38
15
12
33
1.85
21296--21794
22
23.0
22
69
11
169
36
15
9
39
1.79
21475--21578
46
2.3
45
81
3
120
40
13
7
38
1.73
21760--21826
19
3.5
19
89
2
98
25
20
10
43
1.84

Tables:   1

The End!