Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011198.1 Corchorus capsularis cultivar CVL-1 contig11219, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27045

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
944--1439
35
14.2
35
90
3
462
27
18
19
34
1.95
4849--4966
53
2.2
53
87
3
166
36
15
15
33
1.89
4978--5007
7
4.3
7
100
0
60
13
0
13
73
1.10
6744--6778
1
35.0
1
100
0
70
0
0
0
100
0.00
14602--14631
14
2.1
14
100
0
60
26
30
6
36
1.82
16271--16304
17
2.0
17
100
0
68
17
17
23
41
1.90
19916--19956
19
2.2
19
100
0
82
26
0
9
63
1.25
20480--21038
131
4.3
131
89
1
696
39
14
13
32
1.85
20481--21038
261
2.1
262
85
3
721
39
14
13
32
1.85

Tables:   1

The End!