Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011199.1 Corchorus capsularis cultivar CVL-1 contig11220, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7880

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
338--379
2
21.0
2
85
0
57
50
7
0
42
1.30
1346--1439
34
2.9
31
78
9
107
28
20
25
25
1.99
1343--1447
34
3.2
31
75
14
79
26
24
24
23
2.00
6444--6505
30
2.1
30
96
0
115
50
29
1
19
1.57
7123--7201
37
2.1
38
90
4
124
36
18
8
35
1.83
7230--7289
31
1.9
31
96
0
111
36
16
11
35
1.85

Tables:   1

The End!