Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011200.1 Corchorus capsularis cultivar CVL-1 contig11221, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18339

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3196--3275
41
1.9
42
90
7
128
40
8
11
40
1.72
3170--3341
90
1.9
92
81
9
210
40
8
9
41
1.67
3651--3706
28
2.0
28
96
0
103
35
17
19
26
1.94
7715--7764
25
2.0
25
84
7
66
40
4
2
54
1.31
7858--7930
36
2.1
34
87
5
101
46
19
4
30
1.68
12879--12945
28
2.4
28
76
20
70
23
5
0
70
1.09
12900--12936
13
2.6
15
83
12
51
21
0
0
78
0.75
12912--12944
9
3.6
9
92
8
57
24
0
0
75
0.80
12905--12942
13
2.9
13
88
11
60
21
0
0
78
0.74
15113--15752
331
1.9
332
92
0
1068
34
13
15
36
1.87
16534--16856
160
2.0
160
100
0
646
29
12
8
50
1.68

Tables:   1

The End!