Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011205.1 Corchorus capsularis cultivar CVL-1 contig11226, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14510

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
279--308
2
15.0
2
100
0
60
50
0
0
50
1.00
352--424
22
3.5
22
71
14
66
57
1
2
38
1.22
353--396
11
4.2
11
80
8
56
56
0
4
38
1.20
1183--1356
89
2.0
89
84
2
233
28
18
18
33
1.96
1439--1583
32
4.5
32
86
5
184
23
17
26
31
1.97
3374--3406
2
16.5
2
100
0
66
51
0
0
48
1.00
5601--5655
16
3.4
16
73
14
51
56
21
10
10
1.64
5610--5653
16
2.8
15
86
6
52
54
22
13
9
1.67
5904--5974
32
2.2
32
92
0
115
40
38
8
12
1.74
13775--13814
19
2.1
19
85
0
53
12
47
5
35
1.63
14457--14487
2
15.5
2
100
0
62
51
0
0
48
1.00

Tables:   1

The End!