Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011208.1 Corchorus capsularis cultivar CVL-1 contig11229, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14746

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2218--2248
2
15.5
2
93
0
53
48
0
0
51
1.00
7368--7526
31
5.4
31
77
13
147
16
22
27
33
1.96
7415--7517
53
1.9
53
90
0
161
16
20
27
35
1.94
9229--9265
15
2.5
15
95
0
65
24
18
13
43
1.86
9260--9289
15
1.9
16
93
6
53
13
16
20
50
1.78
13812--14126
63
5.0
63
91
6
516
15
20
17
46
1.85

Tables:   1

The End!