Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011219.1 Corchorus capsularis cultivar CVL-1 contig11240, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16388

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1539--1607
24
2.9
24
78
8
86
43
27
5
23
1.76
7355--7393
18
2.2
18
100
0
78
30
30
10
28
1.90
10635--10831
13
13.5
13
66
22
56
49
0
9
40
1.39
10603--10784
87
2.1
89
88
7
273
50
0
10
38
1.42
10741--10802
30
2.1
30
87
0
88
48
0
8
43
1.32
10752--10806
17
3.5
17
73
19
64
47
0
9
43
1.35
10752--10814
30
2.1
30
88
5
92
49
0
9
41
1.35

Tables:   1

The End!