Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011224.1 Corchorus capsularis cultivar CVL-1 contig11245, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  92773

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
204--282
33
2.5
30
78
11
95
39
13
8
37
1.77
218--294
33
2.3
33
88
0
109
44
15
9
31
1.78
324--428
33
3.2
32
78
5
111
45
20
8
24
1.79
2857--2919
33
1.9
33
96
0
117
9
25
42
22
1.83
2862--2968
33
3.2
33
81
9
110
9
27
42
20
1.82
12866--12902
19
2.0
18
89
5
56
29
21
8
40
1.82
26781--26829
26
1.9
25
83
4
62
48
12
20
18
1.79
27593--27646
23
2.3
23
100
0
108
12
38
40
7
1.72
29506--29539
18
1.9
18
88
5
52
64
2
0
32
1.08
32966--32997
11
2.8
12
86
13
50
34
0
18
46
1.49
34361--34391
6
5.3
6
96
3
55
35
0
12
51
1.40
35814--35854
15
2.7
15
96
0
73
43
21
26
7
1.79
37493--37521
10
2.9
10
100
0
58
41
0
27
31
1.56
40609--40637
5
5.8
5
100
0
58
82
0
0
17
0.66
52591--52625
17
2.1
17
100
0
70
45
14
22
17
1.84
54884--54997
40
2.8
40
81
2
131
19
19
4
57
1.58
55016--55103
17
5.4
17
65
10
58
17
22
6
53
1.67
54975--55149
32
5.5
32
90
1
246
15
19
5
59
1.56
54975--55149
96
1.8
94
90
2
278
15
19
5
59
1.56
62143--62172
14
2.1
15
93
6
53
83
6
3
6
0.90
67712--67758
11
4.6
10
79
12
51
4
12
0
82
0.80
67715--67758
22
2.0
22
86
0
61
4
13
0
81
0.83
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
69212--69263
29
1.9
26
81
14
61
19
15
32
32
1.93
73037--73121
33
2.6
33
88
0
125
23
36
29
10
1.88
73059--73143
33
2.6
33
85
7
102
22
40
27
10
1.87
76423--76529
16
6.8
16
90
1
171
6
12
38
42
1.68
76518--76572
6
9.5
6
76
7
51
1
21
47
29
1.61
76518--76572
23
2.4
23
87
0
83
1
21
47
29
1.61
77321--77351
16
1.9
16
93
0
53
3
16
54
25
1.56
77313--77353
6
7.2
6
78
10
50
2
14
48
34
1.57
77341--77385
16
2.8
16
83
6
56
6
15
40
37
1.74
83040--83087
25
1.9
25
86
0
69
29
20
27
22
1.99

Tables:   1

The End!