Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011226.1 Corchorus capsularis cultivar CVL-1 contig11247, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12062

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
115--163
25
2.0
25
84
4
64
36
0
28
34
1.58
969--1159
84
2.4
80
87
7
271
42
19
8
29
1.81
1142--1246
54
2.0
54
92
1
176
40
25
1
32
1.67
5518--5549
11
2.9
11
90
0
55
37
0
18
43
1.51
5518--5577
22
2.9
22
76
19
65
41
3
18
36
1.67
5528--5565
19
2.1
18
90
5
58
44
2
21
31
1.66
6913--6943
14
2.2
14
94
0
53
16
6
6
70
1.29
9645--9673
12
2.3
13
94
5
51
17
6
20
55
1.65
11166--11197
11
2.9
11
90
0
55
37
0
18
43
1.51

Tables:   1

The End!