Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011230.1 Corchorus capsularis cultivar CVL-1 contig11251, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19376

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3811--3929
36
3.3
35
81
8
150
51
12
10
25
1.72
3988--4132
11
13.1
11
72
9
89
48
11
21
18
1.78
3988--4091
44
2.3
45
80
8
115
50
10
17
22
1.76
4126--4361
36
6.6
36
85
1
316
42
10
22
25
1.84
4363--4464
32
3.0
33
80
15
102
48
8
15
27
1.75
4376--4464
37
2.6
33
84
8
99
49
10
13
26
1.74
16528--16579
25
2.0
26
88
7
79
15
23
23
38
1.92

Tables:   1

The End!