Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011232.1 Corchorus capsularis cultivar CVL-1 contig11253, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9316

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1262--1292
15
2.1
15
93
0
53
16
6
22
54
1.64
2496--2566
36
2.0
36
100
0
142
47
4
39
8
1.53
5412--5453
21
2.0
21
95
0
75
19
30
33
16
1.94
5433--5571
33
4.2
32
83
7
136
20
42
28
8
1.82
6812--6851
19
2.1
19
86
9
55
30
15
15
40
1.87

Tables:   1

The End!