Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011236.1 Corchorus capsularis cultivar CVL-1 contig11257, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6391

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--44
2
21.5
2
95
4
79
47
2
0
50
1.13
183--225
11
3.9
11
90
0
68
46
6
4
41
1.51
179--225
22
2.1
22
96
0
85
46
6
4
42
1.48
1874--2196
107
3.0
107
84
2
391
30
24
18
26
1.98
2689--2787
31
3.3
31
73
13
116
35
20
21
23
1.96
2656--2787
59
2.2
59
91
1
210
33
18
20
27
1.96
2674--2759
28
3.0
28
71
15
84
31
19
20
27
1.97
2822--2893
31
2.3
31
92
0
117
23
19
15
41
1.89
4796--5654
438
2.0
437
83
4
1081
30
13
13
42
1.82

Tables:   1

The End!