Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011243.1 Corchorus capsularis cultivar CVL-1 contig11264, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9969

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1398--1467
27
2.5
28
90
2
106
52
1
12
32
1.48
2247--2282
10
3.5
10
88
7
54
0
16
0
83
0.65
2517--2545
14
2.0
15
93
6
51
27
0
24
48
1.51
5344--5413
37
1.9
36
91
2
113
37
8
17
37
1.80
8889--8960
34
2.1
34
86
0
99
23
27
1
47
1.60
9874--9969
2
48.0
2
100
0
192
50
50
0
0
1.00

Tables:   1

The End!