Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011247.1 Corchorus capsularis cultivar CVL-1 contig11268, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26490

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
289--513
113
2.0
113
94
0
396
28
30
21
20
1.98
1801--1842
11
3.8
11
87
0
57
50
2
4
42
1.36
1796--1842
22
2.1
22
96
0
85
48
4
4
42
1.42
4450--4502
24
2.3
23
83
3
61
66
5
1
26
1.25
9330--9358
2
14.5
2
100
0
58
48
0
0
51
1.00
20129--21194
199
5.3
198
82
5
1225
34
17
13
34
1.89
22760--22823
26
2.5
24
80
14
74
37
12
6
43
1.68

Tables:   1

The End!