Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011258.1 Corchorus capsularis cultivar CVL-1 contig11279, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16822

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
876--921
21
2.2
21
100
0
92
50
8
23
17
1.74
1593--1664
16
4.5
16
76
10
67
37
38
15
8
1.77
1593--1663
32
2.2
32
85
5
99
38
38
15
8
1.78
2553--2621
27
2.6
27
80
0
84
30
11
23
34
1.90
3374--3434
3
19.0
3
90
6
77
37
1
0
60
1.07
5369--6254
442
2.0
433
81
5
1022
32
14
12
41
1.82
6322--6358
2
18.5
2
100
0
74
48
0
0
51
1.00
10041--10092
17
3.1
17
91
5
79
11
30
3
53
1.54
10408--10498
33
2.8
33
96
0
164
29
21
21
26
1.99
10513--10642
54
2.5
53
82
6
142
30
18
16
33
1.94

Tables:   1

The End!