Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011260.1 Corchorus capsularis cultivar CVL-1 contig11281, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33227

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1345--1370
12
2.2
12
100
0
52
50
0
0
50
1.00
1542--1622
42
1.9
43
87
7
121
35
25
18
19
1.95
9168--9227
2
30.5
2
93
3
104
0
48
1
50
1.11
16320--16383
17
3.7
17
76
12
58
60
1
3
34
1.22
17225--17301
39
2.0
39
84
5
102
31
10
15
42
1.81
17398--17459
24
2.4
26
78
15
74
33
0
32
33
1.58
17477--17504
13
2.2
13
100
0
56
53
7
0
39
1.28
17672--17710
6
6.7
6
97
2
71
66
0
0
33
0.92
19556--19593
11
3.5
11
89
10
51
39
0
2
57
1.12
25593--25642
25
2.0
25
88
0
73
48
22
12
18
1.80
29816--29887
29
2.5
27
78
14
81
43
23
0
33
1.54

Tables:   1

The End!