Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011261.1 Corchorus capsularis cultivar CVL-1 contig11282, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21093

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
728--812
30
2.8
31
92
3
131
28
16
29
25
1.97
3040--3066
2
13.5
2
100
0
54
48
0
0
51
1.00
4741--4770
12
2.5
12
94
0
51
33
23
0
43
1.54
9233--9263
2
15.5
2
100
0
62
48
0
0
51
1.00
10723--10760
2
20.5
2
84
15
55
55
0
0
44
0.99
10723--10760
19
2.1
18
95
5
67
55
0
0
44
0.99
12216--12250
11
3.2
11
83
0
52
77
17
5
0
0.96

Tables:   1

The End!